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ERX1987485: 454 GS FLX Titanium sequencing
1 LS454 (454 GS FLX Titanium) run: 2,182 spots, 1.2M bases, 782,606b downloads

Design: SAMPLE AMF METAGENOME IN ONE PLANT INDIVIDUAL
Submitted by: UNIVERSITY OF TARTU
Study: Arbuscular mycorrhizal communities on islands worldwide
show Abstracthide Abstract
Island biogeography theory is one of the most influential paradigms in ecology. That island characteristics, including remoteness, can profoundly modulate biological diversity has been borne out by studies of animals and plants. By contrast, the processes influencing microbial diversity, life history traits and functions in island systems are largely unknown. We sequenced arbuscular mycorrhizal (AM) fungal DNA from plant roots collected on 13 islands worldwide and compared AM fungal diversity on islands with existing data from mainland sites. AM fungal communities on islands were as diverse as mainland communities and diversity was maintained even on the remotest islands (< 6000 km from the closest mainland). Nonetheless, AM fungal communities on distant islands comprised a higher proportion of ruderal taxa and taxa with large spores, indicating that establishment of AM fungi on distant islands may require tolerance of significant environmental stress. Largely in contrast to patterns recorded for macro-organisms, efficient long-distance dispersal favours certain functional traits and outweighs endemism and extinction in shaping island communities of AM fungal diversity.
Sample: RSxHR4
SAMEA103975910 • ERS1665078 • All experiments • All runs
Library:
Name: NG6155_RSxHR4
Instrument: 454 GS FLX Titanium
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Construction protocol: PCR WITH AMF-SPECIFIC PRIMERS
Runs: 1 run, 2,182 spots, 1.2M bases, 782,606b
Run# of Spots# of BasesSizePublished
ERR19297582,1821.2M782,606b2018-05-03

ID:
5506594

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