U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX26210114: Whole genome sequencing of Zymoseptoria tritici: ZT699
1 ILLUMINA (Illumina HiSeq 3000) run: 8.4M spots, 2.5G bases, 1Gb downloads

Design: Library preparation using standard protocols of MP-GC Cologne (DNA FS Library); 2x150bp
Submitted by: University of Kiel / MPI for Evolutionary Biology
Study: Population genomics of Iranian wheat- and Aegilops-infecting Zymoseptoria tritici isolates
show Abstracthide Abstract
Host specialisation is considered a strong driver of pathogen evolution. In this project, we isolated unique collections of Z. tritici from wild (Aegilops spp.) and domesticated (Triticum aestivum) host grasses in the Middle East. Using a clone-corrected subset of isolates from each collection, we then performed whole-genome sequencing of each isolate with the aim to identify evolutionary and molecular patterns of host specialisation using population genomics approaches.
Sample:
SAMN43819829 • SRS22752179 • All experiments • All runs
Library:
Name: ZT699
Instrument: Illumina HiSeq 3000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM PCR
Layout: PAIRED
Runs: 1 run, 8.4M spots, 2.5G bases, 1Gb
Run# of Spots# of BasesSizePublished
SRR308095088,423,8432.5G1Gb2024-10-02

ID:
35373158

Supplemental Content