U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX23883747: Shotgun metagenomics of soils from a TX rainfall gradient after release from long-term drought
1 ILLUMINA (Illumina NovaSeq 6000) run: 49.2M spots, 14.9G bases, 4.6Gb downloads

Design: Total genomic DNA was extracted from two 0.25g aliquots using DNeasy Power Soil Kits (Qiagen, Germantown, MD, USA) and combined, then quantified fluorometrically, and normalized to 0.5 ng/L. Libraries were prepared following Baym et al. (2015 PLoS ONE https://doi.org/10.1371/journal.pone.0128036) using Nextera adapters and sequenced (2 150 bp) with Illumina NovaSeq 6000 at the NC State University Genome Sequencing Lab., Adapters: N711, S503
Submitted by: North Carolina State University
Study: Soil shotgun metagenomics across a TX rainfall gradient after release from long-term drought
PRJNA1085749 • SRP494163 • All experiments • All runs
show Abstracthide Abstract
To examine how soil microbial communities recover from drought, we examined the shotgun metagenome of soils collected seasonally across the Edwards Plateau in central Texas during an El Nino year.
Sample: Shotgun metagenomics of soils from a TX rainfall gradient after release from long-term drought
SAMN40331503 • SRS20709445 • All experiments • All runs
Organism: soil metagenome
Library:
Name: TX_SGMG_49
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 49.2M spots, 14.9G bases, 4.6Gb
Run# of Spots# of BasesSizePublished
SRR2827382149,218,99514.9G4.6Gb2024-06-21

ID:
32188489

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...