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SRX23856921: 143B model treated with B6H12
1 ILLUMINA (Illumina NovaSeq 6000) run: 405.3M spots, 129.7G bases, 41.2Gb downloads

Design: Dissociated tumors from the 143B osteosarcoma model were sorted for live cells using a Live/Dead stain at the Stanford Shared FACS facility. Single-cell RNAseq libraries were prepared using the Chromium Next GEM Single Cell 5' v2 platform (10x GENOMICS). Libraries were sent to Novogene for sequencing on a NovoSeq S4 lane (PE150) with approximately 30,000 mean reads per cell.
Submitted by: Stanford University
Study: Engineered CD47 enhances antitumor immunity by inducing selective tumor phagocytosis while sparing T cells
show Abstracthide Abstract
Adoptively transferred T cells and agents designed to block the CD47/SIRPa axis are promising antitumor therapeutics, which activate distinct arms of the immune system. We administered anti-CD47 (aCD47) with adoptively transferred T cells with the goal of enhancing antitumor efficacy but observed rapid macrophage-mediated clearance of T cells expressing chimeric antigen receptors (CARs) or engineered T cell receptors, which blunted therapeutic benefit. aCD47 mediated CAR T clearance was potent and rapid enough to serve as an effective safety switch. To overcome this challenge, we engineered a CD47 variant (47E) that engaged SIRPa and provided dont-eat-me signals but was not blocked by aCD47 antibodies. Adoptive transfer of TCR or CAR T cells expressing 47E were resistant to macrophage mediated ablation following aCD47, and mediated significant, sustained macrophage recruitment into the TME. Although many of the recruited macrophages manifested an M2-like profile, the combined therapy resulted in synergistic enhancement in antitumor efficacy. This work identifies macrophages as major regulators of T cell persistence and illustrates the fundamental challenge of combining T cell directed therapeutics with those designed to activate macrophages. It further delivers a therapeutic approach capable of simultaneously harnessing the antitumor effects of T cells and macrophages that manifests markedly enhanced potency against solid tumors.
Sample: 143B model treated with B6H12
SAMN40284033 • SRS20676431 • All experiments • All runs
Organism: Mus musculus
Library:
Name: ab
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC SINGLE CELL
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 405.3M spots, 129.7G bases, 41.2Gb
Run# of Spots# of BasesSizePublished
SRR28246152405,298,378129.7G41.2Gb2024-03-06

ID:
32160916

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