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ERX11894970: Illumina HiSeq 2500 paired end sequencing
1 ILLUMINA (Illumina HiSeq 2500) run: 6.3M spots, 1.3G bases, 621.7Mb downloads

Submitted by: IMPERIAL COLLEGE LONDON
Study: The impact of HTLV-1 expression on the 3D structure and expression of host chromatin
show Abstracthide Abstract
We used cultured clones of HTLV-1-infected cells, each with a single HTLV-1 provirus integrated at a known position. We used flow-cytometry to sort cells to those actively transcribing the viral transactivator Tax (or marker thereof, GFP) and those which are not. We report chromatin contacts (using q4C-seq) and RNA expression in the sorted fractions, each fraction in two replicates.
Sample: 20F-3-60-2
SAMEA115121730 • ERS17797875 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2500
Strategy: OTHER
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Construction protocol: q4C-seq
Runs: 1 run, 6.3M spots, 1.3G bases, 621.7Mb
Run# of Spots# of BasesSizePublished
ERR125194406,262,8471.3G621.7Mb2024-02-23

ID:
32000064

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