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ERX11894966: Illumina HiSeq 2500 paired end sequencing
1 ILLUMINA (Illumina HiSeq 2500) run: 6.7M spots, 1.3G bases, 665.2Mb downloads

Submitted by: IMPERIAL COLLEGE LONDON
Study: The impact of HTLV-1 expression on the 3D structure and expression of host chromatin
show Abstracthide Abstract
We used cultured clones of HTLV-1-infected cells, each with a single HTLV-1 provirus integrated at a known position. We used flow-cytometry to sort cells to those actively transcribing the viral transactivator Tax (or marker thereof, GFP) and those which are not. We report chromatin contacts (using q4C-seq) and RNA expression in the sorted fractions, each fraction in two replicates.
Sample: 20D-11-63-3Tax
SAMEA115121726 • ERS17797871 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2500
Strategy: OTHER
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Construction protocol: q4C-seq
Runs: 1 run, 6.7M spots, 1.3G bases, 665.2Mb
Run# of Spots# of BasesSizePublished
ERR125194366,748,2921.3G665.2Mb2024-02-23

ID:
32000121

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