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DRX467800: NextSeq 500 sequencing of SAMD00623158
1 ILLUMINA (NextSeq 500) run: 9.7M spots, 734.9M bases, 431.1Mb downloads

Submitted by: IRCMS
Study: Lactate-treated cancer-associated fibroblasts of pancreatic ductal adenocarcinoma
show Abstracthide Abstract
Pancreatic ductal adenocarcinoma (PDAC) cells are known for enhanced glycolysis, which leads accumulation of lactate in a PDAC tumor microenvironment (TME). Evidence suggests that the interaction between the TME and tumor cells mediated by lactate can facilitate the reprogramming of stromal cells, such as cancer-associated fibroblasts (CAFs). We performed transcriptomic analysis of CAFs derived from a PDAC patient tumor sample to explore the genes changed in CAFs by lactate stimulation. We found that the expression of genes related to immunosuppression, such as IL6 and phosphatidylinositol glycan anchor biosynthesis class F (PIGF), was significantly upregulated in lactate-stimulated CAFs compared to the control.
Sample: CAF-3_Lac_0mM
SAMD00623158 • DRS359788 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: PolyA
Layout: SINGLE
Construction protocol:
Runs: 1 run, 9.7M spots, 734.9M bases, 431.1Mb
Run# of Spots# of BasesSizePublished
DRR4835749,670,222734.9M431.1Mb2024-01-17

ID:
31443764

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