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DRX504214: Illumina MiSeq paired end sequencing of SAMD00662721
1 ILLUMINA (Illumina MiSeq) run: 50,487 spots, 30.4M bases, 15.2Mb downloads

Submitted by: UCPH
Study: Fungal communities associated with seeds of European ash (Fraxinus excelsior)
show Abstracthide Abstract
Fungal communities associated with seeds of European ash (F. excelsior) were observed using ITS-based metabarcoding. Five to ten seeds were collected from different ramets per genotype and two genotypes were included in this study. The seeds were surfaced sterilized before DNA extraction from stalk and wing using Qiagen DNeasy Plant Pro kit. The primer pair BITS and B58S3 (Bokulich et al., 2013) was used to amplify the ITS1 region before sequencing with Illumina Miseq v3 (2x300 bp).
Sample: ITS1 amplified from genomic DNA from seed wing (no.1 pos.29-14) of Fraxinus excelsior clone 33
SAMD00662721 • DRS356314 • All experiments • All runs
Library:
Name: FexWING_158
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Construction protocol:
Runs: 1 run, 50,487 spots, 30.4M bases, 15.2Mb
Run# of Spots# of BasesSizePublished
DRR52032850,48730.4M15.2Mb2024-01-05

ID:
31221110

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