SRA

Gelatinous zooplankton (GZP), i.e., ctenophores, cnidarian medusae, chaetognaths, appendicularians and salps, are considered climate change winners. This becomes particularly obvious in the Southern Ocean, which has undergone a significant shift from a krill based to a salp based ecosystem over the last decades. A better knowledge on the role of gelatinous invertebrates as prey is needed to predict the impact of such a gelatinous shift. Until recently, GZP was considered as a trophic dead end. However, their true importance in diets has remained unresolved due to the rapid digestion of their watery and soft tissues inside the stomach of the predators. In this study we want to validate the paradigm shift from GZP being considered as survival food to be considered a regular prey item for two demersal fish species (Notothenia rossii and Notothenia coriiceps) of the Southern Ocean through a multimarker (COI and 18S) metabarcoding approach. We found that GZP taxa commonly occur in the diets of both species, represented by appendicularians, cnidarians, chaetognaths and ctenophores. Salps were the most abundant prey group, preyed upon by each individual of both species. We recovered a wide range of different taxa in their diets, from primary producers to highly abundant invertebrates, thus we propose these two notothenioid species as natural samplers of the ecosystem in study. Finally, we want to point out the importance of multi-marker metabarcoding approaches, given the differential amplification and sequencing success of different markers for specific groups and the unequal taxonomic coverage of the reference databases. The output of each marker was highly complementary, since an important prey item such as salps, was only detected with 18S, while other taxa (e.g., Arthropoda) were represented with a higher taxonomic resolution with COI.