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SRX22556533: S. anginosus
1 ILLUMINA (NextSeq 2000) run: 1.2M spots, 367.3M bases, 128Mb downloads

Design: Qiagen Blood and Tissue was used to extraxct the DNA, Illumina DNA prep tagmentation kit was used for library construction, sequencing was done with a 300 cycle flow cell kit.
Submitted by: Loyola Univeristy Chicago
Study: Female Urinary Microbiota Genome Sequencing
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample:
SAMN38159167 • SRS19565075 • All experiments • All runs
Library:
Name: UMB1479
Instrument: NextSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.2M spots, 367.3M bases, 128Mb
Run# of Spots# of BasesSizePublished
SRR268615941,240,622367.3M128Mb2023-11-17

ID:
30552418

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