sRNA-seq of Gossypium hirsutum - SRA - NCBI

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SRX21605363: sRNA-seq of Gossypium hirsutum
1 ILLUMINA (HiSeq X Ten) run: 24.8M spots, 3.7G bases, 1.2Gb downloads

Design: Hiseq Single-End

Submitted by: Chinese Academy of Agricultural Sciences

Study: sRNA sequence of VdThit-RNAi-1/2 and coker312

PRJNA1012122 • SRP458116 • All experiments • All runs

show Abstracthide Abstract

The CDS sequence of VdThit from Verticillium dahliae was introduced into cotton genome, and the sRNA in cotton was sequenced.

Sample: 9

SAMN37240017 • SRS18779022 • All experiments • All runs

Organism: Gossypium hirsutum

Library:

Name: 9

Instrument: HiSeq X Ten

Strategy: miRNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 24.8M spots, 3.7G bases, 1.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR25884972	24,802,052	3.7G	1.2Gb	2024-09-15

ID:: 29188562

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SRA Links for BioSample (Select 37240017) (1)
SRA
txid8585[Organism:noexp] (86)
Identical Protein Groups
PMC for SRA (Select 24628593) (1)
PMC
PREDICTED: Gallus gallus mitogen-activated protein kinase kinase kinase 3-like (...
PREDICTED: Gallus gallus mitogen-activated protein kinase kinase kinase 3-like (LOC420419), transcript variant X6, mRNA
gi|2201762901|ref|XM_046910877.1|

Nucleotide
Chain A, Structural basis for 5'-end-specific recognition of the guide RNA stran...
Chain A, Structural basis for 5'-end-specific recognition of the guide RNA strand by the A. fulgidus PIWI protein
gi|62738763|pdb|1YTU|A

Protein

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