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SRX21185667: GSM7668507: Wt-FB2_326_251_S5; Anopheles gambiae; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 44M spots, 13.3G bases, 4.1Gb downloads

External Id: GSM7668507_r1
Submitted by: Internal Medicine, Yale School of Medicine
Study: Anopheles gambiae mosGILT regulates innate immune genes and zpg expression
show Abstracthide Abstract
Gene edited mosquitoes lacking a gamma-interferon-inducible lysosomal thiol reductase-like protein, namely (mosGILTnull) have decreased Plasmodium infection, which is linked to impaired ovarian development and immune activation. The transcriptome of A. gambiae mosGILTnull was therefore compared to wild type (WT) by RNA-sequencing to delineate mosGILT-dependent pathways. Compared to WT mosquitoes, mosGILTnull A. gambiae demonstrated altered expression of genes related to oogenesis and 20-hydroxyecdysone synthesis, as well as immune-related genes. In the serendipitous discovery zpg, an essential regulator of germ cell development was found to be one of the most downregulated genes in mosGILTnull mosquitoes. These results provide the crucial missing link between two previous studies on role of zpg and mosGILT in mosquito development. This study further demonstrates that mosGILT has the potential to serve as a target for the biological control of mosquito vectors and to influence the Plasmodium life cycle within the vector. Overall design: We utilized RNA-seq to compare the transcriptome of mosGILT wildtype and knockout mosquitoes after a blood meal
Sample: Wt-FB2_326_251_S5
SAMN36749475 • SRS18445692 • All experiments • All runs
Library:
Name: GSM7668507
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: The whole body, ovaries, and fat bodies were collected from blood-fed mosquitoes 24 h after completion of the meal. Total RNA was extracted from the whole body, ovaries, or fat bodies from mosquitoes. Trizol was added to the tissues and RNA was isolated using a RNeasy Mini Kit (QIAGEN) RNA libraries were prepared for sequencing using standard Illumina protocols
Runs: 1 run, 44M spots, 13.3G bases, 4.1Gb
Run# of Spots# of BasesSizePublished
SRR2545275043,959,33313.3G4.1Gb2023-11-26

ID:
28621656

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