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SRX997398: GSM1659544: cFB_N_02; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 60.2M spots, 6.1G bases, 2Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Investigation about fibroblasts of different origins in culture
show Abstracthide Abstract
The goal of this study was to determine if fibroblasts from different origin (skin, colon, tumors) were keeping their characteristic while extracted and cultured ex vivo for several passages. HUVEC was used as a control, being cells from a different background. Surprisingly, fibroblasts from different origins are losing their independant characteristic to cluster in a similar way after 5-6 passages in culture in vitro, showing an activated status. Overall design: Fibroblasts were extracted from human skin, colon normal stroma and colon tumor stroma. HUVECs were extracted from human samples at the same time. All cells, each group from 3 different patients, were grown on plastic for 5 passages and mRNA was extracted to perform RNASeq analysis.
Sample: cFB_N_02
SAMN03487289 • SRS911504 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Machery-Nagel mRNA NucleoSpin was used following manufacturer's instructions RNA-seq libraries were prepared using the Illumina TruSeq Stranded mRNA protocol
Experiment attributes:
GEO Accession: GSM1659544
Links:
External link:
Runs: 1 run, 60.2M spots, 6.1G bases, 2Gb
Run# of Spots# of BasesSizePublished
SRR197642860,242,3486.1G2Gb2015-05-11

ID:
1448284

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