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SRX19862177: Amplicon-Seq of Leucanthemum halleri: leaf
1 OXFORD_NANOPORE (MinION) run: 21,032 spots, 31.9M bases, 27.4Mb downloads

Design: Nanopore library prep (SQK-LSK109, EXP-NBD104/EXP-NBD114) with amplicons from identified loci, for Flongle FLO-FLG001 on MinION Mk1B
Submitted by: University of Regensburg
Study: Nanopore sequencing data of CompCOS loci enriched from four species of Leucanthemum via target capture, and of amplicons from 15 markers and 40 Leucanthemum species
show Abstracthide Abstract
Hybridization-based target enrichment was performed on four representative species of Leucanthemum, using a commercially available probe kit for Asteraceae (CompCOS loci). The sequenced target capture data were mined for loci being putatively single- or low-copy in Leucanthemum, using a newly developed pipeline. The identified markers were then amplified in 40 Leucanthemum individuals plus two outgroup genera and the sequenced data used for species tree inference.
Sample:
SAMN34066087 • SRS17219586 • All experiments • All runs
Library:
Name: 162-03_ampl_MinIONflongle
Instrument: MinION
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 21,032 spots, 31.9M bases, 27.4Mb
Run# of Spots# of BasesSizePublished
SRR2406087121,03231.9M27.4Mb2024-04-22

ID:
27232495

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