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SRX19319799: GSM7035168: Cpa3Cre/+, immunized, 2-bottle test (natural avoidance) day 7, rep3 [AS-929312]; Mus musculus; RNA-Seq
1 ILLUMINA (NextSeq 1000) run: 20.5M spots, 4.5G bases, 1.4Gb downloads

External Id: GSM7035168_r1
Submitted by: Cellular Immunology, Immunology, German Cancer Research Center
Study: Mast cells link immune sensing to antigen avoidance behavior [intestine]
PRJNA933010 • SRP421630 • All experiments • All runs
show Abstracthide Abstract
We investigated antigen-specific avoidance behavior in mice, and found that is critically dependent on mast cells. We analyzed gene expression comparing naive versus immunized wild type mice, and versus mast cell-deficient mice at different times following antigen exposure Overall design: Comparative gene expression profiling analysis of RNA-seq data for Cpa3+/+ (wild type) and Cpa3Cre/+ (mast cell-deficient) mice
Sample: Cpa3Cre/+, immunized, 2-bottle test (natural avoidance) day 7, rep3 [AS-929312]
SAMN33219702 • SRS16718229 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM7035168
Instrument: NextSeq 1000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was isolated from whole Jejunum (fat and Peyer's plaques removed) according to the instructions of the PureLink RNA Mini kit (Invitrogen) RNA libraries for RNA-seq were prepared using TruSew Stranded RNA Kit (Illumina) following manufacturer's protocols.
Runs: 1 run, 20.5M spots, 4.5G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR2337916820,487,5624.5G1.4Gb2023-04-11

ID:
26567994

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