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SRX19207513: Linked read sequencing of Sinapis alba
1 ILLUMINA (Illumina HiSeq 3000) run: 131M spots, 40.3G bases, 15.3Gb downloads

Design: DNA was extracted with the DNeasy Plant Mini Kit (QIAGEN) following the manufacturer's instructions and size-selected for fragments larger than 40 Kbp using BluePippin (SAGE Sciences). Quality control of the size-selected DNA was performed on Qubit and TapeStation. A 10x linked-read library (Zheng et al., 2016; Marks et al., 2017) was created for each species using one nanogram of DNA
Submitted by: Heinrich-Heine University of Duesseldorf
Study: C4 Breed - Comparative genomics of C3 vs C3-C4 plants in Brassicaceae familly.
show Abstracthide Abstract
This project intends to sequence the genome and transcriptome of several Brassicaceae species, including C3 and C3-4 intermediates, and thereafter to pinpoint genetic differences between groups with different photosynthesis kinds. By cross-referencing genetic data with detailed phenotype evaluation, we aim to identify new genetic connections to the development of C3-4 intermediacy.
Sample:
SAMN31871767 • SRS16616098 • All experiments • All runs
Organism: Sinapis alba
Library:
Name: SA_linked
Instrument: Illumina HiSeq 3000
Strategy: WGS
Source: GENOMIC
Selection: unspecified
Layout: PAIRED
Runs: 1 run, 131M spots, 40.3G bases, 15.3Gb
Run# of Spots# of BasesSizePublished
SRR23263291130,958,78040.3G15.3Gb2023-01-28

ID:
26409802

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