GSM6064698: ovule-3; Brassica carinata x Brassica rapa; RNA-Seq - SRA

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SRX14990518: GSM6064698: ovule-3; Brassica carinata x Brassica rapa; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 22.6M spots, 6.8G bases, 2Gb downloads

External Id: GSM6064698_r1

Submitted by: ZHENGZHOU UNIVERSITY

Study: Transcriptome Profiling Identified Candidate Genes Contributing to Male and Female Gamete Development in Synthetic Brassica Allohexaploids

PRJNA831828 • SRP372145 • All experiments • All runs

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The aim of the present study was to explore commonly and preferentially expressed genes for male and female gamete development in synthetic Brassica allohexaploids. We performed differential expression analysis to identify precise genes that regulate developmental events during male and female gamete development of Brassica allohexaploids. Overall design: The leaf, anther from meiosis to pollen maturation and ovule from meiosis to mature embryo sac formation of synthetic Brassica allohexaploids have three repetitions respectively, and the leaves are the control group.

Sample: ovule-3

SAMN27763812 • SRS12739850 • All experiments • All runs

Organism: Brassica carinata x Brassica rapa

Library:

Name: GSM6064698

Instrument: Illumina NovaSeq 6000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: A total amount of 1-3μg RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using VAHTS Universal V6 RNA-seq Library Prep Kit for Illumina ® (NR604-01/02 following the manufacturer's recommendations and index codes were added to attribute sequences to each sample.

Runs: 1 run, 22.6M spots, 6.8G bases, 2Gb

Run	# of Spots	# of Bases	Size	Published
SRR18912565	22,560,095	6.8G	2Gb	2022-06-29

ID:: 21445249

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