U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX535138: GSM1382014: ERG; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 15.4M spots, 786.2M bases, 462.3Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Direct Induction of Hematoendothelial Program in Human Pluripotent Stem Cells by Transcriptional Regulators
show Abstracthide Abstract
Advancing pluripotent stem cell technologies for modeling hematopoietic stem cell development and therapies requires identifying key regulators of hematopoietic commitment from human pluripotent stem cells (hPSCs). Here, by screening the effect of 27 candidate factors, we identified two groups of transcriptional regulators capable of inducing distinct hematopoietic programs from hPSCs: pan-myeloid (GATA2 and ETV2) and erythro-megakaryocytic (GATA2 and TAL1). In both cases, these transcription factors directly converted hPSCs to endothelium, which subsequently transformed into blood cells with pan-myeloid or eryhtro-megakaryocytic potential. These data demonstrate that two distinct genetic programs regulate the hematopoietic development from hPSCs and that both of these programs specify hPSCs directly to hemogenic endothelial cells. Additionally, this study provides a novel method for efficient induction of blood and endothelial cells from hPSCs via overexpression of modified mRNA for selected transcription factors. Overall design: mRNA profiles of 54 samples, including 4 samples in duplicate and 6 control samples were generated by deep sequencing, using Illumina HiSeq 2500.
Sample: ERG
SAMN02767217 • SRS603757 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: RNA isolation procedure was performed according to QIAGEN protocol for RNAeasy micro kit Cat# 74004 Samples were then prepared for sequencing using the Illumina TruSeq RNA Sample Preparation Kit v2 (RS-122-2001), according to the manufacturer's protocol
Experiment attributes:
GEO Accession: GSM1382014
Links:
External link:
Runs: 1 run, 15.4M spots, 786.2M bases, 462.3Mb
Run# of Spots# of BasesSizePublished
SRR127455815,414,933786.2M462.3Mb2014-07-14

ID:
764647

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...