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SRX14736907: WGS skim of Oreohelix sp. "Chelan" 1: foot muscle
1 ILLUMINA (Illumina NovaSeq 6000) run: 144.9M spots, 46.7G bases, 14Gb downloads

Design: NEBnext Ultra I library prep
Submitted by: University of Idaho
Study: Oreohelix idahoensis genome assembly project
show Abstracthide Abstract
Limestone outcrops, scattered rocky areas composed of calcium carbonate (CaCO3), are often host to a diverse, specialized, and threatened biomineralizing fauna. However, the lack of genomic resources for biomineralizing limestone-endemic species has hindered our understanding of the genomic mechanisms underlying morphological evolution in these environments. In this study, we present the genome of a limestone specialized land snail that expresses heavily biomineralized shell ornaments: Oreohelix idahoensis. We utilized genomic long and linked reads (PacBio CLR: 324.5 Gb; 10x Genomics: 425.8 Gb) with transcriptomic Iso-Seq reads (PacBio CCS: 52 Gb) to produce a relatively contiguous and complete ~5.4 Gb genome assembly of O. idahoensis, the largest molluscan genome assembly published to date (May/2022).
Sample:
SAMN27252768 • SRS12498815 • All experiments • All runs
Library:
Name: skim_chelan1
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 144.9M spots, 46.7G bases, 14Gb
Run# of Spots# of BasesSizePublished
SRR18609872144,886,85946.7G14Gb2022-04-09

ID:
21092792

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