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SRX14526540: RNA-Seq of Solanum pennellii LA0716 and Solanum Lycopersicum VF36 F2 hybrids: Leaf of Low7
1 ILLUMINA (Illumina HiSeq 4000) run: 47.7M spots, 14.3G bases, 5.4Gb downloads

Design: RNA-Seq libraries were prepared using Illumina TruSeq Stranded mRNA Library Preparation kit LT from polyA+ -selected RNA samples. After quality control and quantitation, libraries were sequenced on the Illumina HiSeq 4000 150-bp x150-bp paired-end sequencing platform following manufacturer's specifications.
Submitted by: Texas A&M University
Study: Raw sequence reads of F2 population derived from the cross between Solanum lycopersicum cv. VF36 and Solanum pennellii LA0716
show Abstracthide Abstract
Acylsugars, specialized metabolites with defense activities, are secreted by trichomes of many solanaceous plants. We identified differentially expressed genes between high- and low-acylsugar-producing F2 plants derived from a cross between Solanum lycopersicum and S. pennellii, which produce acylsugars ~1% and ~20% of leaf dry weight, respectively.
Sample:
SAMN26816139 • SRS12324287 • All experiments • All runs
Library:
Name: MK17
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: PAIRED
Runs: 1 run, 47.7M spots, 14.3G bases, 5.4Gb
Run# of Spots# of BasesSizePublished
SRR1839255447,658,03914.3G5.4Gb2022-10-28

ID:
20725021

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