Single Primer Enrichment Technology (SPET) for high-throughput genoty... - SRA

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SRX14271449: Single Primer Enrichment Technology (SPET) for high-throughput genotyping of 3500 eggplant accessions
1 ILLUMINA (NextSeq 500) run: 779,885 spots, 117M bases, 46.6Mb downloads

Design: SPET standard protocol (Tecan/Nugen) using 5000 probes. The samples were then mixed in equimolar concentration for SE sequencing.

Submitted by: University of Torino

Study: Analysis of >3,400 worldwide eggplant accessions reveals two independent domestication events and multiple migration-diversification routes

PRJNA808188 • SRP360451 • All experiments • All runs

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G2P-SOL aims at bringing into full fruition the seeds from tens of thousands of genetic accessions of the four major Solanaceous food crops (potato, tomato, pepper and eggplant) that are stored in 'genebanks' worldwide. It is reported the application of SPET genotyping for studying the genetic variation and population structure of about 3500 accessions from cultivated and wild genepools of eggplant.

Sample:

SAMN26207755 • SRS12090167 • All experiments • All runs

Organism: Solanum anguivi

Library:

Name: GPE027370

Instrument: NextSeq 500

Strategy: OTHER

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 779,885 spots, 117M bases, 46.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR18121083	779,885	117M	46.6Mb	2023-09-11

ID:: 20228596

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