Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364398: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275873' containing sample 'Staphylococcus aureus M0483'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.8M spots, 563.6M bases, 245.8Mb downloads

UUID: 0ecfe2c8-b648-4805-ad69-5ce38c4bbb60

Design: Illumina sequencing of Staphylococcus aureus M0483 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216491 • SRP031246 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0483

SAMN02325445 • SRS490817 • All experiments • All runs

Organism: Staphylococcus aureus M0483

Library:

Name: Pond-275873

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 386056.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJTY

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G45038

research_project: RP-433

root_sample_id: SM-4CYK8

sample_id: SM-4RJTY

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.8M spots, 563.6M bases, 245.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011939	1,389,082	280.6M	122.7Mb	2013-10-16
SRR1011940	1,400,805	283M	123.1Mb	2013-10-16

ID:: 521216

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