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DRX189356: Illumina HiSeq 2500 paired end sequencing of SAMD00092817
1 ILLUMINA (Illumina HiSeq 2500) run: 27.4M spots, 5.5G bases, 3.3Gb downloads

Submitted by: OKA_IPSR
Study: Transcriptome analysis of infection process of Heterosigma akashiwo virus strain 53
PRJDB6241 • DRP007783 • All experiments • All runs
show Abstracthide Abstract
Heterosigma akashiwo virus (HaV) is a new member of Phycodnaviridae, that possesses large double stranded DNA genome. Comparative analysis of its genome and other large dsDNA viruses revealed that HaV is unique new member of the viral family. To understand its biological feature more in detail, we conducted transcriptome analysis of the viral infection process employing different types of RNAseq approaches.
Sample: Heterosigma akashiow strain H93616,Heterosigma akashiwo virus strain 53-infected,420 mpi,replicate,1,ribosomal RNA-depleted
SAMD00092817 • DRS206856 • All experiments • All runs
Organism: Heterosigma akashiwo
Library:
Name: H93616_RiboZero_420mpi_1
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Inverse rRNA
Layout: PAIRED
Construction protocol: Total RNA was prepared usingPureLink RNA purification kit (Ambion)reagent according to the manufacturer's protocol. The ribosomal RNA was removed by using RiboZero Plant rRNA removal kit (Illumina) . The sequence library was prepared according to the Agilent SureSelect Strand Specific RNA Prep Kit protocol (skip the PolyA selection step).
Spot descriptor:
1  forward101  reverse

Runs: 1 run, 27.4M spots, 5.5G bases, 3.3Gb
Run# of Spots# of BasesSizePublished
DRR19893927,426,8325.5G3.3Gb2021-10-16

ID:
17174755

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