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SRX10895719: DNA amplicon sequencing of Glaucomys oregonensis: Museum specimen
1 ILLUMINA (Illumina MiSeq) run: 25,759 spots, 7.7M bases, 4.3Mb downloads

Design: Sequencing of 11 microsatellites and ~300 bp of the mitochondrial cytochrome-b gene
Submitted by: Humboldt State University
Study: First population genetic analysis of the Humboldt's flying squirrel.
show Abstracthide Abstract
The intraspecific genetic structure and diversity within the Humboldt's flying squirrel (Glaucomys oregonensis) has not yet been characterized despite its elevation to full species in 2017. The San Bernardino flying squirrel (G. o. californicus) is thought to be the southernmost population of G. oregonensis and is restricted to the San Bernardino and San Jacinto Mountains in California, but recent surveys indicate they have been extirpated from the latter locality. We amplified and sequenced approximately 300 bp of the mitochondrial cytochrome-b gene and 11 nuclear microsatellites in a total of 147 samples (tissue, hair, and museum specimen) using the Illumina high-throughput sequencing platform to investigate the genetic structure and diversity within this species and subspecies.
Sample:
SAMN19195491 • SRS8988629 • All experiments • All runs
Library:
Name: UMMZ79766
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 25,759 spots, 7.7M bases, 4.3Mb
Run# of Spots# of BasesSizePublished
SRR1455240925,7597.7M4.3Mb2022-02-06

ID:
14491268

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