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SRX10478013: GSM5215176: TF ChIP-seq from K562 (ENCLB390LNC); Homo sapiens; ChIP-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 27.1M spots, 5.5G bases, 2.2Gb downloads

Submitted by: NCBI (GEO)
Study: GSE59395: Genome-wide map of regulatory interactions in the human genome
PRJNA63443 • SRP012412 • All experiments • All runs
show Abstracthide Abstract
Summary: We generated a genome-wide interaction map of regulatory elements in human cells (K562, GM12878) using Chromatin Interaction Analysis by Paired-End Tag sequencing (ChIA-PET) experiments targeting six broadly distributed factors. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Overall Design: Chromatin interactions identified by ChIA-PET for 4 different histone modifications, RAD21 and RNAPII in K562 cell line, two biological replicates each.
Sample: ENCODE biosample ENCBS599RPQ
SAMN18513673 • SRS8606592 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 4000
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: PAIRED
Construction protocol: general protocol: https://www.encodeproject.org/documents/716003cd-3ce7-41ce-b1e3-6f203b6632a0/@@download/attachment/ENCODE4%20_Snyder_ChIP-seq_BiorupterTruSeqProtocol_v1.pdf
Experiment attributes:
GEO Accession: GSM5215176
Links:
Runs: 1 run, 27.1M spots, 5.5G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR1410696127,052,6525.5G2.2Gb2021-04-05

ID:
13891867

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