Hyb-Seq of south american Orchids - SRA

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SRX7680704: Hyb-Seq of south american Orchids
1 ILLUMINA (Illumina MiSeq) run: 359,373 spots, 115.1M bases, 50.5Mb downloads

Design: Library preparation followed the NEBNext Ultra DNA Library Prep Kit for Illumina protocol (New England Biolabs, Ipswich, MA, USA), but the amount of all solutions was reduced by half, and purification the QIAquick PCR Purification kit (Qiagen, Venlo, Netherlands) protocol.

Submitted by: Institute of Botany of the Czech Academy of Sciences

Study: Hyb-Seq data of Orchid subtribe Pleurothallidinae

PRJNA604559 • SRP247393 • All experiments • All runs

show Abstracthide Abstract

In Pleurothallidinae, the most species-rich subtribe of orchids on Earth, we built a completely new phylogeny and map on it the type of endoreplication, to trace how orchids' unique phenomenon of partial endoreplication affects the differential diversification of lineages.

Sample:

SAMN13974050 • SRS6107927 • All experiments • All runs

Organism: Stelis trichostoma

Library:

Name: L12_P545

Instrument: Illumina MiSeq

Strategy: OTHER

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 359,373 spots, 115.1M bases, 50.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR11028238	359,373	115.1M	50.5Mb	2020-02-28

ID:: 10026090

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