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SRX7422953: WGS: P. aeruginosa UMB7567
1 ILLUMINA (NextSeq 500) run: 1.2M spots, 335.9M bases, 141.9Mb downloads

Design: DNA was extracted using the Qiagen DNeasy UltraClean Microbial Kit and quantified using the Qubit Fluorometer. DNA was sent to the Microbial Genomic Sequencing Center (MiGS) at the University of Pittsburgh for sequencing.
Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
PRJNA316969 • SRP072679 • All experiments • All runs
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample:
SAMN13634712 • SRS5869073 • All experiments • All runs
Organism: Pseudomonas aeruginosa
Library:
Name: Pa7567
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.2M spots, 335.9M bases, 141.9Mb
Run# of Spots# of BasesSizePublished
SRR107475751,242,354335.9M141.9Mb2019-12-23

ID:
9714754

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