U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX6878787: WGS of Lactobacillus jensenii UMB246
1 ILLUMINA (Illumina MiSeq) run: 254,586 spots, 114.3M bases, 61.5Mb downloads

Design: DNA extracted using Qiagen UltraClean Microbial Kit. Library preparation using Nextera kit. 250x2 paired-end reads.
Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
PRJNA316969 • SRP072679 • All experiments • All runs
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample:
SAMN12796998 • SRS5414535 • All experiments • All runs
Organism: Lactobacillus jensenii
Library:
Name: Lj246
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 254,586 spots, 114.3M bases, 61.5Mb
Run# of Spots# of BasesSizePublished
SRR10153407254,586114.3M61.5Mb2019-09-20

ID:
9050378

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...