Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422782: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293513' containing sample 'Staphylococcus aureus F54494'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 775.4M bases, 380.9Mb downloads

UUID: 6a8a5694-cb72-48f7-92e0-4834a4da32e2

Design: Illumina sequencing of Staphylococcus aureus F54494 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224359 • SRP034982 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F54494

SAMN02383649 • SRS526834 • All experiments • All runs

Organism: Staphylococcus aureus F54494

Library:

Name: Pond-293513

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433195.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J8H

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50735

research_project: RP-509

root_sample_id: SM-4T4TC

sample_id: SM-53J8H

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 775.4M bases, 380.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103380	1,944,712	392.8M	193.1Mb	2014-01-07
SRR1103529	1,893,990	382.6M	187.7Mb	2014-01-07

ID:: 598256

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