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SRX5587471: RNA-seq for perch (Perca fluviatilis) 2014
1 ILLUMINA (Illumina HiSeq 2500) run: 11.9M spots, 2.7G bases, 753.8Mb downloads

Design: The 10 individual samples were first barcoded, and a single Illumina TruSeq stranded library was then generated and sequenced two lanes of Illumina HiSeq2500 with a 2126 bp setup
Submitted by: Chalmers University of Technology
Study: Gene expression and biomarker responses in perch at a biomonitoring site in the Baltic Sea – possible influence of natural brominated chemicals
show Abstracthide Abstract
Perch (Perca fluviatilis) has been used in biological effect monitoring in a programme for integrated coastal fish monitoring at the reference site Kvädöfjärden along the Swedish east coast, which is a site characterized by no or minor local anthropogenic influences. Using a set of physiological and biochemical endpoints (i.e., biomarkers), clear time trends for “early warning” signs of impaired health are noted in the perch from this site, possibly as a result of increased baseline pollution.
Sample: 2014 sample
SAMN11280419 • SRS4548778 • All experiments • All runs
Library:
Name: Kv2014_P422
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 11.9M spots, 2.7G bases, 753.8Mb
Run# of Spots# of BasesSizePublished
SRR879861811,933,3252.7G753.8Mb2019-05-22

ID:
7538428

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