RNAseq of isolates from 02_Ctrl knock-down cells - SRA

SRX365672: RNAseq of isolates from 02_Ctrl knock-down cells
1 ILLUMINA (Illumina HiSeq 2000) run: 15.1M spots, 3.1G bases, 1.9Gb downloads

Design: HeLa cells were transfected with siRNAs targeting the gene noted in the library title. After verification of knock-down efficiency by western blots total RNA was depleted of rRNA (RiboMinus) and RNA-seq libraries were prepared using the ScriptSeq v2 kit (EpiCentre). Libraries were sequenced 100 nt paired end on an Illumina HiSeq 2000 platform.

Submitted by: AARHUS UNIVERSITY

Study: Homo sapiens strain:HeLa cells Transcriptome or Gene expression

PRJNA223244 • SRP031620 • All experiments • All runs

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Functional characterization of an identified physical connection between the cap-binding complex and the RNA exosome

Sample: Generic sample from Homo Sapiens

SAMN02378504 • SRS492039 • All experiments • All runs

Organism: Homo sapiens

Library:

Name: 02_Ctrl

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 15.1M spots, 3.1G bases, 1.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR1027584	15,142,024	3.1G	1.9Gb	2013-11-08

ID:: 522771

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Sequence Read Archive

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