Pocillopora damicornis confronted to bacterial stress (Cb) RNAseq lib... - SRA

SRX352381: Pocillopora damicornis confronted to bacterial stress (Cb) RNAseq library
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 10.2M spots, 1.6G bases, 822.7Mb downloads

Design: mRNA from 3 mini-colonies confronted for 12 days to Vibrio coralliilyticus (25oC) were sequenced by illumina SOLEXA technology (Jeremie Vidal-Dupiol, Nolwenn M Dheilly, Rodolpho Rondon, Christoph Grunau, Celine Cosseau, Kristina Smith, Michael Freitag, Mehdi Adjeroud, Guillaume Mitta)Total RNA was extracted and purified with Trizol (Invitrogen) as previously described (Vidal-Dupiol et al. 2009). Then, the method used for cDNA library construction was done following a published protocol (Fox et al. 2010).

Submitted by: University of Perpignan

Study: Pocillopora damicornis Transcriptome or Gene expression

PRJNA219439 • SRP029998 • All experiments • All runs

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Pocillopora damicornis gene expression analysis

Sample: Pocillopora damicornis confronted to bacterial stress (Cb)

SAMN02358343 • SRS481348 • All experiments • All runs

Organism: Pocillopora damicornis

Library:

Name: Pd_Cb_lib

Instrument: Illumina Genome Analyzer IIx

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: unspecified

Layout: PAIRED

Spot descriptor:

1 forward81 reverse

Runs: 1 run, 10.2M spots, 1.6G bases, 822.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR988551	10,180,520	1.6G	822.7Mb	2015-07-22

ID:: 500555

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