Transcriptome-wide study of genetic basis for local adaptation in nin... - SRA

SRX275395: Transcriptome-wide study of genetic basis for local adaptation in nine-spined sticklebacks
1 LS454 (454 GS FLX) run: 38,173 spots, 9.2M bases, 5.8Mb downloads

Design: Total RNA was extracted from brain tissues using TRIzol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer's protocol. cDNA library was constructed with the SuperScript Double-Stranded cDNA Synthesis Kit (Invitrogen, cat. no. 11917-010), according to the manufacturer's protocol. Equimolar amounts of the total RNA from each of one male and one female were used for the freshwater brain library.

Submitted by: ECOLOGICAL GENETICS RESEARCH UNIT, DEPARTMENT OF BIOSCIENCES, UNIVERSITY OF HELSINKI (ECOLOGICAL GENETICS RESEARCH UNIT, DEPARTMENT OF B)

Study: Pungitius pungitius Transcriptome or Gene expression

PRJNA201008 • SRP022126 • All experiments • All runs

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Transcriptome-wide study to characterize genomic mechanisms underlying repeated ecological adaptation of Pungitius pungitius in nature.

Sample: Generic sample from Pungitius_pungitius

SAMN02116204 • SRS418712 • All experiments • All runs

Organism: Pungitius pungitius

Library:

Name: The freshwater brain library

Instrument: 454 GS FLX

Strategy: EST

Source: TRANSCRIPTOMIC