Transcriptome-wide study of genetic basis for local adaptation in nin... - SRA

SRX275313: Transcriptome-wide study of genetic basis for local adaptation in nine-spined sticklebacks
1 LS454 (454 GS FLX) run: 73,704 spots, 16.8M bases, 10.6Mb downloads

Design: Total RNA was extracted from brain using TRIzol reagent (Invitrogen, Carlsbad, CA, USA) according to the manufacturer's protocol.cDNA library was constructed with the SuperScript Double-Stranded cDNA Synthesis Kit (Invitrogen, cat. no. 11917-010), according to the manufacturer's protocol. Equimolar amounts of the total RNA from each of the two males and two females were pooled for construction of the marine brain library.

Submitted by: ECOLOGICAL GENETICS RESEARCH UNIT, DEPARTMENT OF BIOSCIENCES, UNIVERSITY OF HELSINKI (ECOLOGICAL GENETICS RESEARCH UNIT, DEPARTMENT OF B)

Study: Pungitius pungitius Transcriptome or Gene expression

PRJNA201008 • SRP022126 • All experiments • All runs

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Transcriptome-wide study to characterize genomic mechanisms underlying repeated ecological adaptation of Pungitius pungitius in nature.

Sample: Generic sample from Pungitius_pungitius

SAMN02116202 • SRS418645 • All experiments • All runs

Organism: Pungitius pungitius

Library:

Name: The marine brain library

Instrument: 454 GS FLX

Strategy: EST

Source: TRANSCRIPTOMIC