U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX1804909: Illumina sequencing of Nicotiana attenuata ovaries
1 ILLUMINA (Illumina HiSeq 2000) run: 19.8M spots, 4G bases, 2.6Gb downloads

Design: Nicotiana attenuata wild type plants were germinated and grown in 1 l pots under standard glasshouse conditions as described previously [Kruegel, T., Lim, M., Gase, K., Halitschke, R. and Baldwin, I.T. (2002) Agrobacterium-mediated transformation of Nicotiana attenuata, a model ecological expression system. Chemoecology, 12, 177–183]. Ovaries were harvested from flowers of Nicotiana attenuata. Samples were collected in the afternoon, 60 samples were pooled. Total RNA was isolated and used for Illumina HiSeq library construction.
Submitted by: Max Planck Institute for Chemical Ecology
Study: Nicotiana attenuata cultivar:Utah 30x inbred Transcriptome or Gene expression
PRJNA317743 • SRP075848 • All experiments • All runs
show Abstracthide Abstract
Nicotiana attenuata has been used to study plant-organism interactions (e.g. insect herbivores, pollinators and pathogenic microorganisms) for more than 20 years. A large amount of adaptive biochemical and morphological plasticity responses to environmental signals are known.
Sample: Plant sample (ovaries) from Nicotiana attenuata
SAMN05182693 • SRS1470813 • All experiments • All runs
Organism: Nicotiana attenuata
Library:
Name: NA1513OVA
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward51  reverse

Runs: 1 run, 19.8M spots, 4G bases, 2.6Gb
Run# of Spots# of BasesSizePublished
SRR359752419,804,1634G2.6Gb2016-08-11

ID:
2580647

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...