Illumina sequencing of Nicotiana attenuata anthers - SRA

SRX1804908: Illumina sequencing of Nicotiana attenuata anthers
1 ILLUMINA (Illumina HiSeq 2000) run: 20.7M spots, 4.1G bases, 2.8Gb downloads

Design: Nicotiana attenuata wild type plants were germinated and grown in 1 l pots under standard glasshouse conditions as described previously [Kruegel, T., Lim, M., Gase, K., Halitschke, R. and Baldwin, I.T. (2002) Agrobacterium-mediated transformation of Nicotiana attenuata, a model ecological expression system. Chemoecology, 12, 177–183]. Anthers were harvested from flowers of Nicotiana attenuata. Samples were collected in the afternoon, 60 samples were pooled. Total RNA was isolated and used for Illumina HiSeq library construction.

Submitted by: Max Planck Institute for Chemical Ecology

Study: Nicotiana attenuata cultivar:Utah 30x inbred Transcriptome or Gene expression

PRJNA317743 • SRP075848 • All experiments • All runs

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Nicotiana attenuata has been used to study plant-organism interactions (e.g. insect herbivores, pollinators and pathogenic microorganisms) for more than 20 years. A large amount of adaptive biochemical and morphological plasticity responses to environmental signals are known.

Sample: Plant sample (anthers) from Nicotiana attenuata

SAMN05182692 • SRS1470812 • All experiments • All runs

Organism: Nicotiana attenuata

Library:

Name: NA1512ANT

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward51 reverse

Runs: 1 run, 20.7M spots, 4.1G bases, 2.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR3597523	20,740,211	4.1G	2.8Gb	2016-08-11

ID:: 2580646

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