N. attenuata root untreated 2 h replicate 3 transcriptome - SRA

SRX1740644: N. attenuata root untreated 2 h replicate 3 transcriptome
1 ILLUMINA (Illumina HiSeq 2500) run: 23.3M spots, 4.7G bases, 2.6Gb downloads

Design: XXXXXs from seedling stage Nicotiana attenuata wild type plants were harvested as controls 2 h after starting the experiment. RNA was isolated.

Submitted by: Max Planck Institute for Chemical Ecology

Study: Nicotiana attenuata Root Transcriptome

PRJNA320036 • SRP074311 • All experiments • All runs

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Nicotiana attenuata has been used to study plant-organism interactions (e.g. insect herbivores, pollinators and pathogenic microorganisms) for more than 20 years. A large amount of adaptive biochemical and morphological plasticity responses to environmental signals are known.Here we aim to detect changes in transcriptional patterns with and without smoke treatment.

Sample: Root material from seedling stage Nicotiana attenuata wild type plants (no smoke treatment) harvested after 2 h, used for RNA sequencing.

SAMN04914640 • SRS1420252 • All experiments • All runs

Organism: Nicotiana attenuata

Library:

Name: 3-m2-3

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 23.3M spots, 4.7G bases, 2.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR3473352	23,312,520	4.7G	2.6Gb	2016-09-27

ID:: 2496450

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