RNA-seq_E1CTL2: Sample E1CTL2 - SRA

SRX1491151: RNA-seq_E1CTL2: Sample E1CTL2
1 ILLUMINA (Illumina HiSeq 2500) run: 2M spots, 391.8M bases, 179.7Mb downloads

Design: RNA extracted using Spectrum Plant Total RNA kit. RNA quality assessed. Real-time PCR with standardized 250 ng RNA. RNA samples checked on Caliper GX. 1.5 µg of RNA used as input of TruSeq Stranded mRNA Sample Prep kit for library preparation. mRNA fragmented and purified. Final libraries quantified and quality tested. Cluster generation with cBot and sequencing in paired-end mode on HiSeq2500.

Submitted by: IGA Technology Services (ClinVar-IGA Technology Services)

Study: WATBIO: Linking kinematics and RNA-sequencing in poplar root apex

PRJNA304279 • SRP067564 • All experiments • All runs

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Linking kinematics and RNA-sequencing to unravel signaling in the growing root apex of poplar responding to osmotic stress

Sample: elongation zone of the root apex (4.5 mm). After the removal of the root cap (0.5 mm) and the division zone (1.5 mm), a 4.5 mm-long segment corresponding to the elongation zone was collected.

SAMN04301524 • SRS1212716 • All experiments • All runs

Organism: Populus nigra

Library:

Name: exp510_populus_root_growth_04_ACTTGA_L001

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: other

Layout: PAIRED

Spot descriptor:

1 forward101 reverse

Runs: 1 run, 2M spots, 391.8M bases, 179.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR3032068	1,959,225	391.8M	179.7Mb	2015-12-22

ID:: 2101582

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