CERI-KRISP-K032241 - NGS-SA Severe acute respiratory syndrome coronav... - SRA

SRX13241171: CERI-KRISP-K032241 - NGS-SA Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron sequencing in South Africa
1 ILLUMINA (Illumina MiSeq) run: 299,038 spots, 89.8M bases, 53Mb downloads

Design: Amplicons were generated using the ARTIC PCR tiling method. Libraries were prepared using the Nextera Flex DNA Library Preparation method using Illumina Nextera DNA CD Indexes. Libraries were run on the Illumina Miseq.

Submitted by: KwaZulu-Natal Research Innovation and Sequencing Platform-UKZN

Study: NGS-SA SARS-CoV-2 Omicron Sequencing in South Africa

PRJNA784038 • SRP348159 • All experiments • All runs

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Sequencing of the Severe Acute Respiratory Syndrome Coronavirus 2 Omicron variant in South Africa by the Kwazulu-Natal Research Innovation and Sequencing Platform (KRISP) and the Centre for Epidemic Response and Innovation (CERI).

Sample: =A49&" - NGS-SA Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron sequencing in South Africa"

SAMN23469680 • SRS11165344 • All experiments • All runs

Organism: Severe acute respiratory syndrome coronavirus 2

Library:

Name: CERI-KRISP-K032241

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: VIRAL RNA

Selection: RT-PCR

Layout: PAIRED

Runs: 1 run, 299,038 spots, 89.8M bases, 53Mb

Run	# of Spots	# of Bases	Size	Published
SRR17051937	299,038	89.8M	53Mb	2021-11-27

ID:: 18113080

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