=B39&" - NGS-SA-Omicron SARS-CoV-2 sequencing in South Africa" - SRA

SRX13241127: =B39&" - NGS-SA-Omicron SARS-CoV-2 sequencing in South Africa"
1 OXFORD_NANOPORE (GridION) run: 33,753 spots, 16.3M bases, 14Mb downloads

Design: Amplicons were generated using the ARTIC PCR tiling method. Libraries were prepared using the Ligation Sequencing kit and method using the 96 plate barcodes. Libraries were run on the Oxford Nanopore GridION.

Submitted by: KwaZulu-Natal Research Innovation and Sequencing Platform-UKZN

Study: NGS-SA SARS-CoV-2 Omicron Sequencing in South Africa

PRJNA784038 • SRP348159 • All experiments • All runs

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Sequencing of the Severe Acute Respiratory Syndrome Coronavirus 2 Omicron variant in South Africa by the Kwazulu-Natal Research Innovation and Sequencing Platform (KRISP) and the Centre for Epidemic Response and Innovation (CERI).

Sample: =A39&" - NGS-SA Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron sequencing in South Africa"

SAMN23469670 • SRS11165337 • All experiments • All runs

Organism: Severe acute respiratory syndrome coronavirus 2

Library:

Name: CERI-KRISP-K032230

Instrument: GridION

Strategy: AMPLICON

Source: VIRAL RNA

Selection: RT-PCR

Layout: SINGLE

Runs: 1 run, 33,753 spots, 16.3M bases, 14Mb

Run	# of Spots	# of Bases	Size	Published
SRR17051775	33,753	16.3M	14Mb	2021-11-27

ID:: 18113036

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