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SRX13241033: =B121&" - NGS-SA-Omicron SARS-CoV-2 sequencing in South Africa"
1 OXFORD_NANOPORE (GridION) run: 55,999 spots, 27.4M bases, 23.4Mb downloads

Design: Amplicons were generated using the ARTIC PCR tiling method. Libraries were prepared using the Ligation Sequencing kit and method using the 96 plate barcodes. Libraries were run on the Oxford Nanopore GridION.
Submitted by: KwaZulu-Natal Research Innovation and Sequencing Platform-UKZN
Study: NGS-SA SARS-CoV-2 Omicron Sequencing in South Africa
PRJNA784038 • SRP348159 • All experiments • All runs
show Abstracthide Abstract
Sequencing of the Severe Acute Respiratory Syndrome Coronavirus 2 Omicron variant in South Africa by the Kwazulu-Natal Research Innovation and Sequencing Platform (KRISP) and the Centre for Epidemic Response and Innovation (CERI).
Sample: =A121&" - NGS-SA Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron sequencing in South Africa"
SAMN23469752 • SRS11165562 • All experiments • All runs
Organism: Severe acute respiratory syndrome coronavirus 2
Library:
Name: CERI-KRISP-K032353
Instrument: GridION
Strategy: AMPLICON
Source: VIRAL RNA
Selection: RT-PCR
Layout: SINGLE
Runs: 1 run, 55,999 spots, 27.4M bases, 23.4Mb
Run# of Spots# of BasesSizePublished
SRR1705186955,99927.4M23.4Mb2021-11-27

ID:
18112942

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