RNA-seq of PX-43 fruit - SRA

SRX12218535: RNA-seq of PX-43 fruit
1 ILLUMINA (Illumina HiSeq 2000) run: 30.2M spots, 5.4G bases, 3.7Gb downloads

Design: fruit flesh was immediately put into liquid nitrogen and stored at -80C, then extracted RNA using the SDSphenol method, then build the library using Trueseq kit

Submitted by: Northwest A&F University

Study: RNA-seq sequencing of cultivar and wild apples

PRJNA763361 • SRP337574 • All experiments • All runs

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Using populations genomics approaches combined with SNPs to investigate the relative contributions of each wild apple relative, M. sylvestris, M. sieversii, and a supposed contributor M. baccata- M. hupehensis, to the European and Chinese dessert and rootstock genomes, and crop-wild gene flow during apple domestication.

Sample: PX-43

SAMN21438661 • SRS10194626 • All experiments • All runs

Organism: Malus domestica

Library:

Name: R-72_RNA-seq

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 30.2M spots, 5.4G bases, 3.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR15928407	30,173,870	5.4G	3.7Gb	2022-04-06

ID:: 16138308

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