RNA Sequencing of Metriaclima zebra - SRA

SRX109703: RNA Sequencing of Metriaclima zebra
3 ILLUMINA (Illumina HiSeq 2000) runs: 26.1M spots, 5.5G bases, 3.1Gb downloads

UUID: 0635df97-21a1-4748-8c4d-9d1e38d03b03

Design: RNA Sequencing to improve annotation

Submitted by: Broad Institute (BI)

Study: Maylandia zebra Transcriptome or Gene expression

Metriaclima zebra RNA sequencing from multiple tissues.

Sample: Generic sample from Maylandia zebra

Library:

Name: Solexa-67738

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: dUTP

Spot descriptor:

1 forward barcode

Group tag	Basecalls
	TCCAGCAA

110 reverse

gssr_id: 89243.0

lsid: BROAD:SEQUENCING_SAMPLE:89243.0

material_type: RNA

project: G14318

sample_type: ovary

work_request: 25851

Name	Step	Program	Version	Notes
base caller	2011-08-13 22:24:00.0	GAPipeline	RTA1.12.4.2	Sequencer Application 1.4.8

Runs: 3 runs, 26.1M spots, 5.5G bases, 3.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR385845	8,768,081	1.8G	1Gb	2011-11-30
SRR385851	8,286,980	1.7G	1,019Mb	2011-11-30
SRR385860	9,044,715	1.9G	1.1Gb	2011-11-30

SRA