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SRX311792: GSM1169561: Cbrigg-1-ST-RPF; Caenorhabditis briggsae; OTHER
1 ILLUMINA (Illumina HiSeq 2000) run: 32.3M spots, 1.6G bases, 1Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: mRNA and Ribosome Profiling in Four Nematode Species Traversing a Shared Developmental Transition
show Abstracthide Abstract
mRNA and Ribosome Profiling in Four Nematode Species Traversing a Shared Developmental Transition Overall design: mRNA-seq and Ribo-seq
Sample: Cbrigg-1-ST-RPF
SAMN02209125 • SRS449544 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2000
Strategy: OTHER
Source: TRANSCRIPTOMIC
Selection: other
Layout: SINGLE
Construction protocol: Total mRNA was isolated using Ambion's micro-poly(A) purist kit, fragmented by alkali and heat, followed by library preparation. Ribosome profiling was carried out as described in Ingolia et al (2009) with modifications as Stadler and Fire (2011). Libraries were constructed using the circligase protocol as described in Ingolia et al. (2009) with modifications described in Stadler and Fire (2013).
Experiment attributes:
GEO Accession: GSM1169561
Links:
External link:
Runs: 1 run, 32.3M spots, 1.6G bases, 1Gb
Run# of Spots# of BasesSizePublished
SRR91434632,278,7561.6G1Gb2013-06-21

ID:
435405

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