Ribo-seq of Arabidopsis thaliana: bsf1 - SRA

SRX5627657: Ribo-seq of Arabidopsis thaliana: bsf1
1 ILLUMINA (Illumina HiSeq 4000) run: 43.3M spots, 4.4G bases, 1.3Gb downloads

Design: Ribosome footprints (20-40 nt) as input for NEXTflex Small RNA Sequencing Kit (Bioo Scientific) with custom rRNA depletion step

Submitted by: University of Oregon

Study: Using ribosome profiling to identify changes in chloroplast gene expression in chloroplast biogenesis mutants.

PRJNA530618 • SRP190238 • All experiments • All runs

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We are using ribosome profiling to comprehensively analyze chloroplast gene expression in maize and Arabidopsis mutants lacking predicted chloroplast gene expression factors or proteins involved in the biogenesis of the photosynthetic apparatus.

Sample:

SAMN11321002 • SRS4572838 • All experiments • All runs

Organism: Arabidopsis thaliana

Library:

Name: Ribo-seq bsf1

Instrument: Illumina HiSeq 4000

Strategy: OTHER

Source: TRANSCRIPTOMIC

Selection: other

Layout: SINGLE

Runs: 1 run, 43.3M spots, 4.4G bases, 1.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR8839734	43,288,210	4.4G	1.3Gb	2019-04-03

ID:: 7585389

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