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SRX16370103: RNA-Seq of Cornu aspersum mucus-secreting tissue
1 ILLUMINA (Illumina HiSeq 1000) run: 43.5M spots, 13.1G bases, 4Gb downloads

Design: Snails provided by Peconic Escargot in February 2020 were sacrificed on-site via freezing in a dry ice-ethanol mixture. Whole snails were stored in Invitrogen RNAlater (Thermo Fisher, AM7021) and frozen at 80 C until used. Total RNA was extracted using a Qiagen RNeasy Micro kit (Qiagen, 74004) according to manufacturers instructions, from 6 individual tissue slices from different snails. The integrity of total RNA was confirmed using nanodrop and Agilent 2100 BioAnalyzer analysis. Total RNA was used as a template to perform polyA enriched first strand cDNA synthesis using the HiSeq RNA sample preparation kit for Illumina Sequencing (Illumina Inc., CA) following manufacturers instructions. The cDNA libraries were sequenced using Illumina HiSeq 1000 technology using a paired end flow cell and 80 x 2 cycle sequencing.
Submitted by: City University of New York - Advanced Science Research Center
Study: Comparative Mucomic Analysis of Three Functionally Distinct Cornu aspersum Secretions
show Abstracthide Abstract
Every animal secretes mucus, placing them among the most diverse biological materials. Mucus hydrogels are complex mixtures of water, ions, carbohydrates, and proteins. Uncertainty surrounding their composition and how interactions between components contribute to mucus function complicates efforts to exploit their properties. There is substantial interest in commercializing mucus from the garden snail, Cornu aspersum, for skincare, drug delivery, tissue engineering, and composite materials. C. aspersum secretes three mucus: one shielding the animal from environmental threats, one adhesive mucus from the pedal, and another pedal mucus that is lubricating. It remains a mystery how compositional differences account for their substantially different properties. Here, we characterize mucus proteins, glycosylation, ion content, and mechanical properties to understand structure-function relationships. Revealing differences between C. aspersum mucus shows how considering structure at all levels can inform the design of mucus-inspired materials.
Sample:
SAMN29856568 • SRS14007272 • All experiments • All runs
Organism: Cornu aspersum
Library:
Name: CA_2
Instrument: Illumina HiSeq 1000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 43.5M spots, 13.1G bases, 4Gb
Run# of Spots# of BasesSizePublished
SRR2033702243,507,98413.1G4Gb2023-08-01

ID:
23091170

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