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DRX136021: Illumina HiSeq 2500 sequencing of SAMD00132318
1 ILLUMINA (Illumina HiSeq 2500) run: 33.5M spots, 3.4G bases, 1.6Gb downloads

Submitted by: OSAKA_FB
Study: Analysis of epigenetic modifications in the chicken cells
show Abstracthide Abstract
In vertebrate cells, centromeres are specified epigenetically through the deposition of the centromere-specific histone H3 variant CENP-A. Although deposition of CENP-A-containing nucleosomes is critical for centromere specification, it remains unknown whether additional epigenetic features of centromeric chromatin are required for centromere specification and/or kinetochore assembly. To identify centromere-specific histone modifications, we examined histone modifications at chicken centromeres, which lack highly repetitive sequences using ChIP-seq analysis. Through these analyses, we will understand that detailed molecular mechanisms of the centromere specification and the kinetochore assembly.
Sample: Spike-in ChIP-seq with mouse IgG in gfpCA(QD)_CAKO#2-5 chicken DT40 cells
SAMD00132318 • DRS083251 • All experiments • All runs
Organism: Gallus gallus
Library:
Instrument: Illumina HiSeq 2500
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol:
Spot descriptor:
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Runs: 1 run, 33.5M spots, 3.4G bases, 1.6Gb
Run# of Spots# of BasesSizePublished
DRR14486533,549,9843.4G1.6Gb2018-12-25

ID:
6994456

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