U.S. flag

An official website of the United States government


Send to:

Choose Destination

SRX14280039: RNA-Seq of Hoya cagayanensis flower
1 ILLUMINA (Illumina HiSeq 4000) run: 22.3M spots, 6.7G bases, 1.9Gb downloads

Design: The flower samples were ground into powder using mortar and pestle with liquid nitro-gen. Total RNA was extracted using Trizol reagent (Sigma-Aldrich, USA). Three biological replicates were used for sequencing. The sequencing library was constructed following the NEBNext Ultra RNA Library Prep Kit for Illumina protocol. The poly (A) mRNA isolation was performed using NEBNext Poly(A) mRNA Magnetic. The first strand of cDNA was synthesized with ProtoScript II Reverse Tran-scriptase, while the second strand was synthesized with Second Strand Synthesis Enzyme Mix. The Illumina HiSeq (Illumina, San Diego, CA, USA) platform was used to sequence the cDNA libraries.
Submitted by: National University of Malaysia
Study: Transcriptomics Analysis in Hoya spp.
show Abstracthide Abstract
Trancriptome sequencing of flower from Hoya cagayanensis, Hoya lacunosa and Hoya coriacea (Apocynaceae, Marsdenieae) using Illumina Hiseq 4000. This project aimed to characterize aromatic compound biosynthesis pathway.
SAMN26105032 • SRS12098136 • All experiments • All runs
Name: Hoya cagayanensis
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Selection: PCR
Layout: PAIRED
Runs: 1 run, 22.3M spots, 6.7G bases, 1.9Gb
Run# of Spots# of BasesSizePublished


Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...