Targeted sequencing of Cecropia longipes - SRA

SRX22457914: Targeted sequencing of Cecropia longipes
1 ILLUMINA (Illumina HiSeq 3000) run: 165,577 spots, 49.7M bases, 15.1Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 10

PRJNA1022032 • SRP471028 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Cecropia longipes

SAMN37584558 • SRS19471919 • All experiments • All runs

Organism: Cecropia longipes

Library:

Name: 32d97570-bf30-4545-b7c1-4629e99b5390

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 165,577 spots, 49.7M bases, 15.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR26759423	165,577	49.7M	15.1Mb	2023-11-09

ID:: 30443703

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