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DRX000703: De-novo sequencing of Schima mertensiana cDNA (454 platform)
1 LS454 (454 GS FLX Titanium) run: 149,831 spots, 76.5M bases, 168.3Mb downloads

Design: none provided
Submitted by: FFPRI
Study: Schima mertensiana transcriptome project
show Abstracthide Abstract
Several-year-old seedlings of Schima mertensiana, naturally grown in Bonin Island were used for RNA extraction. Inner bark, and current year twigs were cut and frozen in liquid nitrogen, ground using mortar and pestle. Total RNA was extracted by the CTAB method (Le Provost et al., 2007), and contaminated DNA was removed by SV total RNA isolation system (Promega, Madison, WI).
Sample: Schima mertensiana
SAMD00003860 • DRS000685 • All experiments • All runs
Library:
Name: Schima mertensiana EST
Instrument: 454 GS FLX Titanium
Strategy: EST
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: none provided
Spot descriptor:
         16  forward

Pipeline: show...hide...
Program
454BaseCaller 2.3
Runs: 1 run, 149,831 spots, 76.5M bases, 168.3Mb
Run# of Spots# of BasesSizePublished
DRR001101149,83176.5M168.3Mb2012-06-01

ID:
190297

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